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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11433314_11433804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11433314 - 11433804

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGGCTTATCT

Flanking Amino Acid:

NVKTGIANTLGNKGAVGVSF

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

38.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

83.8

0.76

0.8

76.7

Minor 5ss

32.1

-2

3.1

34.7

41.5

Minor BPS

59.2

0.37

2.1

83.49

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046453

11394663 - 11446031

51369

ENSAPLT00000039963

11394663 - 11445384

50722

ENSAPLT00000021190

11394663 - 11445384

50722