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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11439504_11440531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11439504 - 11440531

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ACCACATTAATT

Flanking Amino Acid:

VVKFIDALPKLTPIISDPEY

Intron Amino Acid Position:

786

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.7

43.7

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

84.9

0.79

0.8

81.7

35.4

Minor 5ss

43.2

-0.7

2.9

55.9

48.3

Minor BPS

56.3

0.28

1.7

68.14

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046453

11394663 - 11446031

51369

ENSAPLT00000039963

11394663 - 11445384

50722

ENSAPLT00000021190

11394663 - 11445384

50722