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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11441497_11442269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11441497 - 11442269

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CACTCCTTAATG

Flanking Amino Acid:

SQGKQREKLYDFVKVERDEI

Intron Amino Acid Position:

865

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

88.4

0.86

0.7

81.3

30.8

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

70.1

0.49

1.4

64.11

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039963

11394663 - 11445384

50722

ENSAPLT00000021190

11394663 - 11445384

50722

ENSAPLT00000046453

11394663 - 11446031

51369