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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11445352_11446028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11445352 - 11446028

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGTGTTTC

5'SS Class:

major

3'SS Sequence:

CTTGTCTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TTGTCTCTACAG

Flanking Amino Acid:

EGPVSRTTTP*

Intron Amino Acid Position:

1251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

71.3

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

82.8

0.74

0.8

76.4

32.3

Minor 5ss

45.9

-0.4

2.7

61.4

43.6

Minor BPS

46.4

-0.4

2.1

56.93

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046453

11394663 - 11446031

51369