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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11480754_11481533_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11480754 - 11481533

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAGAG

5'SS Class:

major

3'SS Sequence:

CTTACAAAGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

AATACTTTATAC

Flanking Amino Acid:

IDPTMLKGKQVSNSFFKKKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.2

59.8

39.1

Major BPS

75.1

0.62

65.6

Major PPT

48.3

-0

1.2

38.6

Minor 5ss

32.2

-2

3.1

38.3

46.8

Minor BPS

49.8

-0

1.7

60.24

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041666

11479921 - 11481580

1660