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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11538105_11538948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11538105 - 11538948

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAGGA

5'SS Class:

major

3'SS Sequence:

TCTATTTTATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTATTTTATTA

Flanking Amino Acid:

KTVQNREHFESTQYSMDHFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

37.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.4

0.62

0.9

78.1

34.9

Minor 5ss

29.9

-2.3

3.3

39.3

45.9

Minor BPS

52.9

0.09

1.6

62.72

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012608

11527150 - 11563542

36393