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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1153821_1157931_R

Intron Information:

Intron Rank:

145653

Intron Class:

major

Intron Phase:

Intron Coordinates:

1153821 - 1157931

Intron Length:

4111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

ATATGCACAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

35.3

Major BPS

64.1

0.35

1.2

45.5

Major PPT

83.7

0.76

0.8

77.2

37.1

Minor 5ss

38.5

-1.3

3.1

50.7

45.7

Minor BPS

45.4

-0.3

2.1

60.14

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024972

1153235 - 1158137

4903