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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11539944_11540502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11539944 - 11540502

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGCATT

5'SS Class:

major

3'SS Sequence:

GTCCCATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCATAT

U12 Branch Point Sequence:

TATTCGTTCACT

Flanking Amino Acid:

GKDIIEDEDGISMPHQWLEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

72.7

44.5

Major BPS

61.6

0.29

1.1

57.2

40.1

Major PPT

76.1

0.59

0.9

69.2

35.9

Minor 5ss

43.5

-0.7

3.2

57.4

Minor BPS

59.4

0.38

2.4

85.03

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012608

11527150 - 11563542

36393