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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11549677_11550934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11549677 - 11550934

Intron Length:

1258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCTGG

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TGTTTGTCAATA

Flanking Amino Acid:

GVSKVRNQRKASKSPCERQI

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

53.6

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

85.5

0.8

0.9

79.9

37.7

Minor 5ss

42.2

-0.9

3.1

56.6

47.6

Minor BPS

49.6

-0

2.2

67.75

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012608

11527150 - 11563542

36393