Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_1155295_1161105_F

Intron Information:

Intron Rank:

150619

Intron Class:

major

Intron Phase:

Intron Coordinates:

1155295 - 1161105

Intron Length:

5811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TAACTCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

TATTCTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.6

34.3

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

79.4

0.66

0.9

73.4

36.4

Minor 5ss

38.5

-1.3

3.3

54.7

43.6

Minor BPS

89.6

1.32

0.8

97.26

26.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046663

1152055 - 1172510

20456