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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11556021_11558693_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11556021 - 11558693

Intron Length:

2673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TATCTTATAGTT

Flanking Amino Acid:

NRAQTLTRDRAFESTLKSWE

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

36.4

Major BPS

82.6

0.81

0.8

71.7

Major PPT

65.8

0.36

61.5

44.5

Minor 5ss

30.3

-2.3

3.2

31.5

42.2

Minor BPS

47.3

-0.1

1.7

67.1

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012608

11527150 - 11563542

36393