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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11560951_11562176_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11560951 - 11562176

Intron Length:

1226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACCAAGT

5'SS Class:

weak_major

3'SS Sequence:

CCATCTCTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

CCATCTCTAACA

Flanking Amino Acid:

KETHSSMGLPVHLWGTEEVA

Intron Amino Acid Position:

1013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

57.5

47.2

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

70.5

0.46

0.9

65.4

34.6

Minor 5ss

39.2

-1.2

3.2

49.6

46.3

Minor BPS

57.4

0.23

1.7

64.46

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012608

11527150 - 11563542

36393