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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11573621_11575580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11573621 - 11575580

Intron Length:

1960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TTGATGTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTATTCTGGACC

Flanking Amino Acid:

SEIFETREATGPSAIKSCSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

67.3

39.4

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

64.6

0.33

1.1

64.4

41.7

Minor 5ss

42.7

-0.8

2.8

58.3

40.4

Minor BPS

65.8

0.48

1.4

74.96

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048255

11573215 - 11582463

9249