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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11575032_11575728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11575032 - 11575728

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TGTTCCTTTTTT

Flanking Amino Acid:

KGWEGKLCNYEVKYTNCSVN

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

58.9

45.3

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

34.6

-1.8

3.4

44.5

44.4

Minor BPS

46.2

-0.2

3.6

80.7

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012519

11573023 - 11582463

9441