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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11575962_11577311_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11575962 - 11577311

Intron Length:

1350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTACTGCTT

5'SS Class:

weak_major

3'SS Sequence:

TTCTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCAGAC

U12 Branch Point Sequence:

GCTTCCTGCAGT

Flanking Amino Acid:

FTGEVFALHFILLQNSKGKF

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.1

0.03

1.2

52.1

44.2

Major BPS

48.6

-0

1.2

46.4

38.9

Major PPT

0.88

0.8

87.9

29.5

Minor 5ss

38.3

-1.3

3.8

61.7

44.1

Minor BPS

48.3

-0

2.2

69.32

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048255

11573215 - 11582463

9249

ENSAPLT00000012519

11573023 - 11582463

9441