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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11577430_11581891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11577430 - 11581891

Intron Length:

4462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGGAAA

5'SS Class:

major

3'SS Sequence:

TTTACTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTCTTGTTTACT

Flanking Amino Acid:

DSGDGFKVRLGKYHRLRTEV

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

69.3

36.5

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

82.9

0.74

0.8

74.2

36.4

Minor 5ss

37.8

-1.4

3.1

44.4

45.6

Minor BPS

53.1

0.18

2.3

79.19

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048255

11573215 - 11582463

9249

ENSAPLT00000012519

11573023 - 11582463

9441