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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11587357_11588956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11587357 - 11588956

Intron Length:

1600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTA

Flanking Amino Acid:

KEIFHSQEKTMEFWFNYKGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

75.2

36.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

32.1

-2

3.1

40.3

45.6

Minor BPS

59.9

0.31

1.8

75.92

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012263

11585081 - 11594509

9429