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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11590514_11591140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11590514 - 11591140

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

CTAAGCTCAAAG

Flanking Amino Acid:

HEDGKRCVQAGPFPCGLIKA

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

36.7

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

79.2

0.66

0.8

70.3

36.3

Minor 5ss

-1.9

3.3

46.8

48.5

Minor BPS

42.9

-0.6

2.1

46.71

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012263

11585081 - 11594509

9429