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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11605736_11606076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11605736 - 11606076

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CCTTTACCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AATTCCTACACT

Flanking Amino Acid:

SGDEEEEEFTGFNQEDLEEE

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.1

0.52

0.9

71.3

33.3

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

58.7

0.35

2.1

79.53

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011980

11597737 - 11614320

16584