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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11652898_11653323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11652898 - 11653323

Intron Length:

426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTAATTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAATT

Flanking Amino Acid:

IRFGEYRCEKEEDLVEIGAK

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

72.2

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.9

0.7

0.9

78.3

39.5

Minor 5ss

31.9

-2.1

3.2

43.3

44.4

Minor BPS

0.36

1.9

83.59

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011016

11650641 - 11669280

18640