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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11653492_11654051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11653492 - 11654051

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

ATTTACTGAGAA

Flanking Amino Acid:

VSLITYAHAKAPYTQDRLSR

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

73.8

0.59

1.3

72.8

Major PPT

90.1

0.9

0.7

85.6

27.2

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

48.3

-0.1

1.9

65.78

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011016

11650641 - 11669280

18640