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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11657629_11658091_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

11657629 - 11658091

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCCTTCATT

5'SS Class:

major

3'SS Sequence:

GTCCTTAACAGAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTGTCCTTAACA

Flanking Amino Acid:

DPDLRDLACQHLPIMKFMGD

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.3

45.3

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

48.1

-0.1

1.7

53.9

39.5

Minor 5ss

36.6

-1.5

57.9

46.3

Minor BPS

90.6

1.27

0.9

91.48

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011016

11650641 - 11669280

18640