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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11663788_11664933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11663788 - 11664933

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

AGGACAATGACA

Flanking Amino Acid:

WNRRNKPVKDGAAMSVAYEV

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

65.8

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

73.6

0.53

0.9

66.1

40.8

Minor 5ss

28.7

-2.4

3.5

34.8

43.6

Minor BPS

44.4

-0.4

1.9

52.83

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011016

11650641 - 11669280

18640