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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11677256_11678068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11677256 - 11678068

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TTTTCTTTCACA

Flanking Amino Acid:

NALGKQWHVEHFVCAKCEKP

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

91.2

0.93

0.6

87.3

23.1

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

75.9

0.81

1.6

86.93

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043399

11675095 - 11697898

22804