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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11708336_11710130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11708336 - 11710130

Intron Length:

1795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TTGTGCTTCATT

Flanking Amino Acid:

PGGPPEERGKGRGNSGPSQR

Intron Amino Acid Position:

1247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.9

36.7

Major BPS

68.1

0.45

73.5

28.6

Major PPT

76.7

0.6

0.8

73.9

35.7

Minor 5ss

34.5

-1.8

3.1

49.5

46.3

Minor BPS

56.4

0.28

2.2

79.19

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010302

11706988 - 11755630

48643