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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11710317_11711180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11710317 - 11711180

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATGATC

Flanking Amino Acid:

PESWDGNREPGPRPDHPPHD

Intron Amino Acid Position:

1185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

70.8

0.47

70.7

38.9

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

57.3

0.21

1.6

71.73

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010302

11706988 - 11755630

48643