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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11711274_11711403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11711274 - 11711403

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTACTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CATCTCTTACTG

Flanking Amino Acid:

VRGRGRGALRGGRKGLLPTP

Intron Amino Acid Position:

1154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.6

0.55

0.9

72.9

37.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

49.5

-0.1

1.7

53.1

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010302

11706988 - 11755630

48643