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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11711571_11714805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11711571 - 11714805

Intron Length:

3235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

CTGCCTATAAAC

Flanking Amino Acid:

DARFRGRRDESFRRGGPSRH

Intron Amino Acid Position:

1098

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

66.3

0.4

1.1

34.4

Major PPT

88.1

0.86

0.6

84.9

22.8

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

48.4

-0.1

1.7

57.87

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010302

11706988 - 11755630

48643