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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11726254_11750213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11726254 - 11750213

Intron Length:

23960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATATTATTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATATTATTAACA

Flanking Amino Acid:

LRCHEERILRGHGADVKCVD

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

72.2

0.5

67.2

42.2

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

0.56

1.5

75.86

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010302

11706988 - 11755630

48643