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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11803267_11804481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11803267 - 11804481

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CCATGTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

CATGTCTTACAG

Flanking Amino Acid:

SILRKKPTTDGLAVRKSLIP

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

79.2

0.72

Major PPT

75.5

0.57

0.9

68.1

37.4

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

46.1

-0.4

1.9

48.75

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044508

11799711 - 11813673

13963

ENSAPLT00000018276

11799711 - 11814789

15079

ENSAPLT00000009650

11799711 - 11814789

15079