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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11805912_11810539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11805912 - 11810539

Intron Length:

4628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

CGTGCTAGGAGT

Flanking Amino Acid:

SSVSTIRQYPVSAQAPNSAI

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

79.4

0.66

0.9

73.2

37.2

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

39.2

-0.7

1.9

52.89

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044508

11799711 - 11813673

13963

ENSAPLT00000009650

11799711 - 11814789

15079