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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11826922_11827742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11826922 - 11827742

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

CTTTTGCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAA

U12 Branch Point Sequence:

TTTTGCTTACAG

Flanking Amino Acid:

ITYILRHYIANPSKEKVYLS

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

59.3

0.23

65.3

28.1

Major PPT

86.1

0.81

0.8

79.9

32.2

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

53.1

-0

2.2

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007476

11824984 - 11862345

37362

ENSAPLT00000028350

11825512 - 11862345

36834