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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11829929_11830015_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11829929 - 11830015

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTGT

5'SS Class:

major

3'SS Sequence:

ATGAGGCCAGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TGCTCTATAAAA

Flanking Amino Acid:

MAPLKVWQLQVAARSSENLT

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

71.6

40.9

Major BPS

65.3

0.38

71.6

30.1

Major PPT

49.5

-0

41.6

38.9

Minor 5ss

45.6

-0.5

2.9

65.6

45.5

Minor BPS

55.2

0.16

1.7

66.33

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834