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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11830849_11834921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11830849 - 11834921

Intron Length:

4073

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTATGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ACACACTGAACT

Flanking Amino Acid:

KDLSQNFPTKRSSNALLSTF

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

62.8

40.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.47

65.4

39.6

Minor 5ss

21.1

-3.3

3.8

43.5

Minor BPS

52.2

0.15

1.7

67.35

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007476

11824984 - 11862345

37362