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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11836262_11836946_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11836262 - 11836946

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

AATTTATGGGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCACTTTTAATT

Flanking Amino Acid:

RQIRKNFHNFVLIVDPTHET

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.9

0.2

1.1

55.8

43.9

Minor 5ss

-1.1

2.9

57.4

41.1

Minor BPS

65.2

0.56

1.2

73.31

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007476

11824984 - 11862345

37362

ENSAPLT00000028350

11825512 - 11862345

36834