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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11837033_11837956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11837033 - 11837956

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

GTTTGTTTGATT

Flanking Amino Acid:

EMFFSNHIPLRIGLVFVVND

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

83.3

28.2

Major BPS

77.7

0.69

83.3

27.7

Major PPT

80.4

0.68

0.9

74.1

40.3

Minor 5ss

36.1

-1.6

2.7

45.4

42.7

Minor BPS

61.4

0.44

1.8

79.17

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362