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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11838093_11838834_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11838093 - 11838834

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATCCCCCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTACCTGTAAAC

Flanking Amino Acid:

NNYAFQTVMSIYNKVKTGDQ

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

75.9

0.58

0.8

65.9

35.2

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

49.5

-0

2.1

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362