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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11838967_11840067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11838967 - 11840067

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

CTTCCCTGGATT

Flanking Amino Acid:

IDSAYDQNRKAARAYYEQTG

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

63.9

0.31

61.5

39.2

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

62.1

0.46

1.5

77.4

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362