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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11840233_11840411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11840233 - 11840411

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTCTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TGATATTTAAAT

Flanking Amino Acid:

TSIFQRAVYLGELSNDQDVV

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

92.9

0.96

0.6

92.3

18.2

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

61.7

0.45

1.6

76.3

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362