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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11840533_11841329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11840533 - 11841329

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGGGAT

5'SS Class:

major

3'SS Sequence:

TTCTCTTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

GGCATCTAAATA

Flanking Amino Acid:

DREYLDLTAMNNFFVDDFAR

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

66.8

38.9

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

82.9

0.74

0.9

84.1

30.9

Minor 5ss

32.2

-2

3.7

42.8

45.4

Minor BPS

47.9

-0.1

1.7

52.8

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362