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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11843416_11844078_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11843416 - 11844078

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTAAACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ACTTTCCTAATA

Flanking Amino Acid:

QLLYDAIKHQKSSNNVRISM

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

62.3

0.28

1.1

55.5

42.9

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

61.2

0.35

1.6

69.79

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007476

11824984 - 11862345

37362

ENSAPLT00000028350

11825512 - 11862345

36834