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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11844286_11844872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11844286 - 11844872

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

ATTTCAATGACA

Flanking Amino Acid:

GADILEFAVGGMDTNIFKEA

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.7

44.5

Major BPS

0.79

0.8

83.7

25.7

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

42.6

-0.8

2.9

49.5

46.5

Minor BPS

57.9

0.24

1.9

75.48

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362