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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11845005_11845938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11845005 - 11845938

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGATCA

5'SS Class:

major

3'SS Sequence:

TTTTTTAATAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

GQRAVISNGRIIGPLEDGEM

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.4

34.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

1.1

76.5

35.8

Minor 5ss

32.3

-2

2.9

31.5

42.2

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362