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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11846070_11848600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11846070 - 11848600

Intron Length:

2531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTCCTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

ATTTTGTGAATA

Flanking Amino Acid:

QIQQLGFEEDLASDLVMKVD

Intron Amino Acid Position:

822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

90.2

0.9

0.6

88.8

20.5

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

52.1

0.06

2.1

70.02

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007476

11824984 - 11862345

37362

ENSAPLT00000028350

11825512 - 11862345

36834