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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11849117_11849584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11849117 - 11849584

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTACTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

CTTTTGTTACTT

Flanking Amino Acid:

DAQRLAPLLLVLNQLINMNL

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.5

31.6

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

84.7

0.78

0.8

82.5

Minor 5ss

45.5

-0.5

2.5

56.3

43.3

Minor BPS

49.7

0.05

2.3

74.4

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007476

11824984 - 11862345

37362

ENSAPLT00000028350

11825512 - 11862345

36834