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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11850600_11853461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11850600 - 11853461

Intron Length:

2862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TAATGCTGAATT

Flanking Amino Acid:

YDLDNIYLEEVDNVVAAEYE

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

82.1

0.72

0.7

31.4

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

57.4

0.31

1.9

75.2

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362