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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11853621_11854607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11853621 - 11854607

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGAAAT

U12 Branch Point Sequence:

TTTCCCTTTACA

Flanking Amino Acid:

IVDTIVMANLGYFQLKANPG

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

79.6

35.4

Major BPS

0.05

1.3

44.6

Major PPT

89.3

0.88

0.6

83.8

24.4

Minor 5ss

-1.1

3.1

54.5

43.9

Minor BPS

75.8

0.81

1.6

85.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362