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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11855139_11856187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11855139 - 11856187

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATATGTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

ATATGTTTCACA

Flanking Amino Acid:

NFKSKIIKVKVQKKLDMMNE

Intron Amino Acid Position:

1089

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.7

1.05

0.6

92.2

16.3

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

75.1

0.57

0.9

68.8

41.3

Minor 5ss

33.9

-1.8

2.8

41.8

44.8

Minor BPS

49.4

-0

2.1

66.11

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362