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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11856277_11856794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11856277 - 11856794

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAGCTA

5'SS Class:

major

3'SS Sequence:

TTCATCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCTCATATAAAC

Flanking Amino Acid:

NESGFWESLKWGFTGGQKNE

Intron Amino Acid Position:

1118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

64.7

40.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.76

0.8

81.1

30.8

Minor 5ss

33.8

-1.8

3.5

43.8

45.8

Minor BPS

46.5

-0.2

1.8

59.19

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007476

11824984 - 11862345

37362

ENSAPLT00000028350

11825512 - 11862345

36834