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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11856900_11857436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11856900 - 11857436

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTAGTTCA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTGATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATTCCTGTAAAT

Flanking Amino Acid:

ASGHLYERFLRIMMLSVLKH

Intron Amino Acid Position:

1153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

70.1

36.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

81.3

0.7

0.9

80.1

Minor 5ss

37.3

-1.4

2.6

44.5

42.8

Minor BPS

53.4

0.19

2.1

77.13

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028350

11825512 - 11862345

36834

ENSAPLT00000007476

11824984 - 11862345

37362